Simple sequence repeat (SSR)
| >UN49800 TTTTGCATAACAAGTAAGAAAATTATACAGAAGCCATAAATGTTTGGAGCATATCATCATATAAAAGCCACAGTGGATTGCAAAAATATTATTC TTGGTGGCCAACTGACAAATTTATAAACTTGTTGGATACACGAAATAATACGTTTTAAGTTGTGTGTACATATTTTGTTTCTGGAATAAACGAA AGAACGAGTATTCTAAGACCACCATGGAGCTTCACCAGTTCTGAAATCTTCCTCGACCCATGGTACAAACACAACTTTCCCATCATCAATACTA ACATCCGCATGAGCCAATGCCAATGACAGAGGAGCAGGACCCCTAACAACTTTTCCTTGGTTGTTGTATTGAGAACCGTGGCATGGGCACATGA ACTTGTTCTCGGCTTTGTTCCATGGGACGACACACCCCAAATGTGTGCACACGGCGTTGATTCCGTATGTTGCTAGGGTTTTGTCATTCTCGAC CACTAGGTATGTGGGGTCTCCCTTTAGACCTTGAGTAAGGGTTCGGTCACCAGGTCCATGGGTCTTTATCCATTCGGCTGCAATAACATCGTTA CCAAGCGCATCCTTAGCGGGAGTACCACCACCACCACCTCCTGAACCTGGTGGAACTAGGAAATAAGTGTAGGGATACAACATGCCGGCGGTTG GAAGACCGAGAGCACCTAAAAGCAACAAGTTCATGAGCTTCCTCTTCTCCATATCCGGTACATTATCAGCTGGAATACTTGTAGCCTGACATGT CACCTTCATTCCTCTTTCCCTTCCCACCATTTGGGTCTTTGCGGCTGATTTTGCCATTAGCCCTTGAGCCGGCAAGAAAGGTCCATTGTTACCC GAACGTAACTGAGAAGAAGTAGCAGGAGAAAGAGTAAAGGCAGCCATTGGAAGATAGAAAGGTGAAGAAGTAATGTTGAAAAGAATATGAAGAT GAAATATGTAAAATGATTGATTTTGGATAAACAAATGGTGGATGGAGGACAAGTA |
Primers for UN49800 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GAGTAAGGGTTCGGTCACCA | 59.966 | 20 | TGCTTTTAGGTGCTCTCGGT | 60.015 | 20 | 180 | 503 | 682 |
| 2 | GGTATGTGGGGTCTCCCTTT | 60.052 | 20 | TGCTTTTAGGTGCTCTCGGT | 60.015 | 20 | 207 | 476 | 682 |
| 3 | ATCCATTCGGCTGCAATAAC | 59.929 | 20 | TGCTTTTAGGTGCTCTCGGT | 60.015 | 20 | 145 | 538 | 682 |