Simple sequence repeat (SSR)
| >UN49330 AATTGAGCATTATTTGAAAGAGTTAATATGGCGAAAGGTTACATAAAGTTACAAGAAGATGCTGATAAACAAAGATAATAAAGACGGCTTGAAT AAACATTTTATCTCTATCAAATTGTGAACAATACATCAGGTCTAAACGGATTCACCTCCAACAGGTTACCAGAATCTACGACAATAAGCACAAC TCATATCTATATATCTCATACAAACTTACTGTGTATCACCGCCACTCTGCTGCCACAAATTAATTATATCAGTAGCCTGATTAAGAAGAACAAC CATCTGCCTTTGAGAAATCCATGGCTTACTTTCAAGCATGATCTTAAGCTCCTCCCAAGCATCTTTCCTTGGCCAAAAATAGTAAGGACTTACA GGAATAGTCCCGTATCCTGGAATTACTTGGTCCAGTGCTATCCCGATATTTTTCTCCATCCATATGAATTTCAATACCAGCCTCGGTTTCTCCA TTGGCTTCACAACCACTCCGAGCTTCTGAGATTGGAGAGGAGTTTCTGTTTCAATAGCTTGAGCTGAGGCGGCTGCTGCTGCTGCTGCTATGAT AGGGGTTCTAATTGTGGAGGCATGATTGAGTTTAACTCTGCTGATGATGAAATGAGAATTTGTAAGAAGAGAAGGTTTGTATGACCAATTCACG CTCATCGTCGCCATGGAAGATAACATTTTCTTCTTTCTTTCTTCTTGAT |
Primers for UN49330 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | ATTGGCTTCACAACCACTCC | 59.973 | 20 | TGCCTCCACAATTAGAACCC | 59.933 | 20 | 117 | 470 | 586 |
| 2 | CTCCGAGCTTCTGAGATTGG | 60.088 | 20 | TGCCTCCACAATTAGAACCC | 59.933 | 20 | 101 | 486 | 586 |
| 3 | TCTTAAGCTCCTCCCAAGCA | 60.088 | 20 | TGCCTCCACAATTAGAACCC | 59.933 | 20 | 263 | 324 | 586 |