Simple sequence repeat (SSR)
| >UN49131 CCACTACCAAACTATATTACAACCCCATATTGAATTATCAAAAGGCCTTAGATTAGGAGAAGAGGGGGAGGGGGACTAATTTTGGTGCCAAAAC AAAACAAATTTAACAGCCAAAGAAGCATAAGTTAACTTGTGCTTGAACCTAGCTTTGGTTCATTCTTGTTTTCCTCCAAGATTCTTTGGAACTC TTTCTCACTTGCTGCAATCAAACGCTTCATAGCGTCGAAGGTAGTGAGCCTAATGCTGCTGTTTGGTAGAGTTTTCAACGCATTTGGAACAAAA CCTCTGTATAAACCAGCAACACCATCCCGAGCAATAATACCAGAAAATGCATCTAAAACCGTATTGTAAGGTGTACTCCTCATCTGCATTTGCC TTCTTATAGTGTCCAACGGATAGCATGTAACAGTTGCAATGGTAGCCGCCACGAAGGCTGTGATAAATGACGCTTCAGTTTTGTTCCGAAACTT TTCTGGCAAAGTCTTCTTCACCAGATCAAAAACGCAAAAGTTGACTGCAACGTAGGGAGCTATACTAATGAGAGAAGGTACAAGTCCCTTATAG AAAGATCCAAGTCCTTCCTCTTTTATCATTCTTACAATAACATTTGACATTGTTCGATGCCCAGGATCAACTGCCATTCGCAATCTGAGGACAT CTAATGGGTACGTCACAAAAGTGGAAGTCATGCCAGCAGAAGCACCAGCAGCTAATCTCCCAATAACAGAAAGCTCGCCATCCTCCCCCCTAAA AAGTTTCTTGTAAGACTCGTAAGCAAATAGCTGGACTGCACTATACGGGAGAATGCGTATCACCTGCGCAAGGTTACCCTTCCAATACCCTTTT ACACCATCTTGGTTTCCTACAGAAATAACTGCCTCTATAAATCCAATTGTTTTCTTTGCACTTTCTTCCCCGGCTCTCAATCCATGAGTCTGCA TGAGGAGTTTAATCCGGTCAAGAGGAGCAGTAACAGTTTTAGCAGCAGCACCAGCAACAGCACCAGCAACAAACACAGCAGCTTCTTTAGGAAC CAAACCCACCACAGCAATTGGGTGTTTCAAAAACTGACCCATTTCTATCTTCTTCTTCTTCTCCGACAAAGATACACAAGCAAACCCACGTGTC CATATGTTGTTCTGTTCCTCGTATGTTATGGGTTCAAGACCAGGAATGTGTTTCCAGATTAAGGTTGGTTTTGGTTGTTGATTCATTTTGGGGT TTTTGGTTTGGTTGTTACGACTTACAAGGAAGATAATAAAAAATAAACTGAAATGTA |
Primers for UN49131 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | CAGTTTTAGCAGCAGCACCA | 60.195 | 20 | CATATGGACACGTGGGTTTG | 59.691 | 20 | 161 | 974 | 1134 |
| 2 | CCGGTCAAGAGGAGCAGTAA | 60.388 | 20 | CATATGGACACGTGGGTTTG | 59.691 | 20 | 181 | 954 | 1134 |
| 3 | ACCAGCAACAAACACAGCAG | 59.946 | 20 | ATATGGACACGTGGGTTTGC | 60.646 | 20 | 132 | 1002 | 1133 |