Simple sequence repeat (SSR)
| >UN48855 GTAAGTTTTTCCTTCTCAAGGAGTAATGATTGCAAGGAAATTGTGAGTGTGTCAGTTAGGTTGGCGTACACATTTGTAGGCATCTCTTTCAAAT CAGGTTCTCCAGGCCTACTCGAGTAAAGGGGCAAACTACTCTCGAATCTAGGGCGCTTTATTGAAGGGTTTGCAGCATACCAACCTTCACTTTG CCCGATCGCACTATGTGTACCAACATGAGATGGATGGTACAGTGCGTCAGAAGACGAACGCTTATAACCGGAATAAAGCGGAAAATCAATATCC GTATCAGCATCGACACTGGGCGGTCCAGACCCCAAAGTATACCTAGCTTCTGTCGGCTGTCTAATCGAAGATGGAGGGTGGTAAGATGGTTCGG TTGGAACGTATTGTTCGACGATTGATTGAATTGAAGAGCTAGAAGTGTAGGTGTGAGGGTACGGATGATGATGATGATTCGCCATTGTTTGTAA ACCCTAGAATGTTTTGAAAAAGTGTGCGATTTGGGAGTGTTTATAAGTTACTCTCTGGGTCGGTCGGTTCCGACATGTAAAGGCAATTAGGGAG GCAATCACTGGCTATGCGCAATGGACCGGTCATCACTCGGTCGGTTGCGAAGGTTGAGGCCGGTC |
Primers for UN48855 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | CGGAATAAAGCGGAAAATCA | 60.033 | 20 | CTCCCAAATCGCACACTTTT | 60.11 | 20 | 251 | 257 | 507 |
| 2 | TAATCGAAGATGGAGGGTGG | 59.887 | 20 | ATTGCCTCCCTAATTGCCTT | 59.93 | 20 | 226 | 344 | 569 |
| 3 | TAATCGAAGATGGAGGGTGG | 59.887 | 20 | CTCCCAAATCGCACACTTTT | 60.11 | 20 | 164 | 344 | 507 |