Simple sequence repeat (SSR)
>UN48219 CACCACTGCAAAATAGTACCTTAATCTACTTAGCTCATAAGCCCGCAACTTTTTCATTGTCAATGTCATCATCATCATCATCGCTTTCATCACT ATCATCTTTAGTGTTTTTTCCATCTTAATTTTTGAAATTGGTTGATGAACACACCATATACTTTTTACAGAATTGGTCAAAGGGTTATGCAATT TTACTCGCATTTGGCTTATTTCCAGCAAACAACCCAACCCAATTCGGCCCTTTCATTAGTAATGGGTAGAAATTTAAATTTTCAAATGAGCGTA TATGTAGTGAATTATAAACTATTTAATAATCGGAACATGAGACACTAATTAAAAGTAGCTAGTCACCAGATTTATACATCAATTCATTCCTGGT TTCCTACTT |
Primers for UN48219 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | ACTTAGCTCATAAGCCCGCA | 60.003 | 20 | GAATTGGGTTGGGTTGTTTG | 60.066 | 20 | 206 | 28 | 233 |
2 | TAGCTCATAAGCCCGCAACT | 60.003 | 20 | GAATTGGGTTGGGTTGTTTG | 60.066 | 20 | 203 | 31 | 233 |
3 | TAGCTCATAAGCCCGCAACT | 60.003 | 20 | GCTGGAAATAAGCCAAATGC | 59.688 | 20 | 184 | 31 | 214 |