Simple sequence repeat (SSR)
| >UN48008 CGACCATACAACTTTGTGTCGAGAGAGAAAGCCACACATTTCTTATGTCAAGAACAACAGAATTTTCAATGGTTGCAAAGTAAACTGAAAGAAC ATTATCATCTTTTGTTCTGACACAACATTTTACACGAATAACAATCCCATAACCTATGCAACCGGCTTGTATAGCTTCTGCACCATTTTCCTGT ATTCTTCTTGATTACTCCAAAGGGCTGCTGCTTGGTTGTTCAAAGGTGAGCTTGTGTTTGGTTCTCCAAGGAGACTCTGGATGGAGATGAGGAT AGTTCTGACATCATAAGCAGATGACCATTTGTCCTGAAGAATATCCAAACAAATAGTTCCGAAAACATCAACGTTGGGGTGAAAGCAACCAGTC TCGAATTTAACCTTTGGAGGCTTAAAAGGGTAATCGTTAGGGAAGGAGAGGGAAAGCTTGTATTCAGTTCCTTCAAAGACGGTGTCTTTGCTCC CAGAAATCGTTCCTTTCCAACAAAAGATGTTGTCTTCCTCTGGAAACGCGGAGATCCCCGAATCACCACTCATCATTAACGCCATCAGTTCTGA CTGTAATCTTTTGAGGACAGATTGAGTATCGACAGATCTAGCGGTTTGAAGAGGTTGTTTGATCGAAGTGGTGGTGGTGGTGGTGTTGGTACTG TTATCTTGATTGTTGTTCATCGTTGTTGACATTGTAGATCCCAAAACTTAGAAGAAGAAGAAATTGATGATTGATTGATCTTCTTCTAATCTTT GAGATAGAGAGACAGAGAATTG |
Primers for UN48008 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | CCAGAAATCGTTCCTTTCCA | 60.044 | 20 | TGTCAACAACGATGAACAACAA | 60.05 | 22 | 220 | 470 | 689 |
| 2 | TCTTTGCTCCCAGAAATCGT | 59.813 | 20 | TGTCAACAACGATGAACAACAA | 60.05 | 22 | 229 | 461 | 689 |
| 3 | GTCTTTGCTCCCAGAAATCG | 59.813 | 20 | TGTCAACAACGATGAACAACAA | 60.05 | 22 | 230 | 460 | 689 |