Simple sequence repeat (SSR)
>UN47855 TAACTAATCAACTAATATTTCAAAAAAAAAGCACACATAGAACAAAAAATTGCGGTGAACACACCAATTCATCACAAACCACCAAACCCTAACC CACGTAACCCTAATTAAGGCGATCGAACAACATAAAGTTCAACGAAAGAAAAGCCTAACAATCGTAACACCCCTATTACAAAGTAATCTAATGT AATCTACAACAAAAAACGTAAATCGATCAAAGTCGCCACAGACCAAAAACCCGGTGGCCGATTTGTTTCGTGTGGTGTGTGTGTGTAAATGGTG AAAGCAATAACAAATATCAGATAAGAAAACAGATGGCAGTCATGCAACGGGTCCGAAGATAGAATCATCGATAAGCAGCTTATTTCATATTTAA GAAAGAGGATAATAAATGGAAATAGAGGAAATGCGGCTATATACCTGGTTAGGGACATTAATATCTA |
Primers for UN47855 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | AACCCTAACCCACGTAACCC | 59.976 | 20 | TTCTATCTTCGGACCCGTTG | 60.066 | 20 | 262 | 85 | 346 |
2 | AAACCACCAAACCCTAACCC | 59.955 | 20 | TTCTATCTTCGGACCCGTTG | 60.066 | 20 | 271 | 76 | 346 |
3 | AGTCGCCACAGACCAAAAAC | 60.156 | 20 | CCGCATTTCCTCTATTTCCA | 60.031 | 20 | 194 | 219 | 412 |