Simple sequence repeat (SSR)
>UN47751 ATATTTGACAATGCAAGTGATAACTCAGCAGCACAAACCAGCAAGAGTTTCTTATGTTGTTTACGTTGTGGAAGAATCCCAAGAGCATCTAGCA TTGATTCATCAAGCTCTTTAGTTTGCAGGAACGTAGCCAAAACACTCAAAGAACCAACCACTTGCGTATCATCTCCACTTGTGATGTATGAGAT CAACGCATCCCTTAAAACTGAAGCAGAACCGCAGCCCTTATGTTGAACACTTGATGAAGTAGATAAACTCGGGATAGAAACTACCATGCTACTA GGCACCAGATTTCCACTTGGATTCTCATCATCTACATGGCTCTCATGAGTTTTGTCATGGTCATCCTTGAAGCCATTGACTTTAGCCTCGGAGC TTGGCAAAAGGGTATCAATAGAACAAATCAGAGCGGCAGCAACAGTATTTGCCAGATCTTTAATCTTAAGGATTCGCAACATGCAAACAAGCAA ATAAAGAGATGTGACAGAGCTGAACTTCATTCCATTAGAAACTTCAATTCTTAGTGAAGGAAGAAGCAGCGGAAATACGAGGAGTTTCAACATG CTGTCCGTGATTAACGTCCCGACATCTGGGATCCCAGCTGATACGACATCACTAAGATAATACAGATTGTCTTCAATTTCATCCACTGCAGATA GTATGGTAGAGGTTGATTCAGGACCCTGGTTCTCTGTGGTAGGAGATATTAATCCATTTAAGCTAATGCAGTGCTCTCTAAAAAATTTAACAAA GTTCACAAAGTAAGCATCATGGGGGGTGCTGGCGATATATTTATTAACATATGCATCTCCGACATGATATATATTTAGAGTCAATGCACGAACT GCAGTACGAATCATGCCCTCTTCATGGAAAGCAAACCGAATCGCCTCGACATAAAGTGGAAAGGAAACTATTTCCTCTTTCTCAGTCTTAACAA GCAAAGATATGGTATTCTTGTTCAACTTCCCACTGATTGCTCTGAGGAAGGATATGTAGTATGACAGTAGCTCTTCATTCCGGAAATCAAAAGG ATAAGTTATAAGGAAGTTTATATGTTCATTACTGAACAAATAATATATGGAGTGGTCACTTTTCAGGTTCTGTATCATTATGCTCATTGTTTGT AGCAATTGGACAGAAACTATCACATTCTTGCTGACCTTTAATATACGTACAAATTCCCCCATGACCTGCTTCTCCATAAAAAACTCGAAGAAAT TTGCGTCATGTTGGTCGCCATATGTTATCAACTCTGCAATTGATCGTAGTGCCTCAATCACAAAATCCTTGTTAACATCATTGACAACTTGAAT TTTCATCAGCTGGTCAGTTAAATATCTGAGTTCATCAAGCGTGAATCGATCTCTAGATCTCCAAAACGAAAACCACATAATGAATTATGATTTT CCAATTCAATTAACCTAACATCATCCTCCTCATAAACAACAAATTTCTCTCCTTGTCAAAATCCTGACCGTTGATGACTGTGTGTGTGTGTGAA ATTGGACGGTGAAGATGAGATCGCCGATTGGG |
Primers for UN47751 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TGCAATTGATCGTAGTGCCT | 59.301 | 20 | ATCGGCGATCTCATCTTCAC | 60.189 | 20 | 276 | 1257 | 1532 |
2 | CTGCAATTGATCGTAGTGCC | 59.301 | 20 | ATCGGCGATCTCATCTTCAC | 60.189 | 20 | 277 | 1256 | 1532 |
3 | TCTCCAAAACGAAAACCACA | 59.145 | 20 | ATCGGCGATCTCATCTTCAC | 60.189 | 20 | 159 | 1374 | 1532 |