Simple sequence repeat (SSR)
>UN47666 TTAATATTGGAATTTAAAGCTAAAGCTCTTTGTCTCAAAGAAGCTTCTTCTTGGGAGTTTCTTGAAATCAAAGTAGCTGCTGATTCTTGCAGCT CTTTACTTTGTTCCAAGATTCTTGATACTTCTTCTGCAGTGTTTCTTTCTGATGAGTTACTGTTGTCACCCATTTGAAAGAAATGGGTCGATCT AGTGGTGGCTTTTGGGTGATGAATGTGGAGGCAATGATGGGTTTTGCGGTGAGTGAACGGTGGTTTATGGTGGTGAATCTAGAGCACACAAAGT GGTGATGATGATGATGATGAGTGGAAGTGGCTTTTTTTTAGACTTTAGCACTGTGTTCTTAAGTTTT |
Primers for UN47666 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | ATGGGTCGATCTAGTGGTGG | 59.803 | 20 | AAGAACACAGTGCTAAAGTCTAAAAA | 57.249 | 26 | 166 | 177 | 342 |
2 | GGCTTTTGGGTGATGAATGT | 59.797 | 20 | AAGAACACAGTGCTAAAGTCTAAAAA | 57.249 | 26 | 148 | 195 | 342 |
3 | GTGGCTTTTGGGTGATGAAT | 59.797 | 20 | AAGAACACAGTGCTAAAGTCTAAAAA | 57.249 | 26 | 150 | 193 | 342 |