Simple sequence repeat (SSR)
>UN47135 CCTCCCCAAAACTGGTAAAAAAAATCTCAGCCACGTCATCACATTGATACCACATAATCAAAAATTAATAGATTCAGGATCACGGATGCTTTTG GAGATCAATCAATCAATCAATCAAACCCTAACCCTAAAAAGTAAAAACACAAACTCTTCTTCAAACGCTAGCTTTCGACAACAGCGGCGTAAAC ACATTCTTCTTACTCACATGATCTTTACATTGCTTCATTTCATCACACATGACGTCATCAAACATCTTCACAAAATCCTCCAGATCAAACATCT TGAACCCCTCCTCATTCCTCTCCAAGACCTTCACCACCTTTTTGAAAAAGATGACGTCACACGGAATCACAAGGCCCCCATTTCTTTGATACCC GTATTCTTCCTCTGCTTTGTTGAGCAAAGTGATGAAGACTGGGAGGTTTAGGAAGCGTGTTGGGATGATGAAACGTGTGTGGTCTTGACCTATG TATACTGCTAGGGTTCCTCCGCAGGAGGTGGTGCAGCGACGGCGCCAACGGTTCATGACTTGTTTTAGACGGACGATTTGGTTTATTTTGTTGT GGGGTTTGGGGGGAGTTGATGACATTGACGGCGGTTGGCGGTTGG |
Primers for UN47135 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TCAGGATCACGGATGCTTTT | 60.603 | 20 | GGTGGTGAAGGTCTTGGAGA | 60.088 | 20 | 247 | 74 | 320 |
2 | TTCAGGATCACGGATGCTTT | 60.603 | 20 | GGTGGTGAAGGTCTTGGAGA | 60.088 | 20 | 248 | 73 | 320 |
3 | ATCTCAGCCACGTCATCACA | 60.279 | 20 | TGAGGAGGGGTTCAAGATGT | 59.505 | 20 | 273 | 24 | 296 |