Simple sequence repeat (SSR)
>UN46634 AAACCCCCAATTCAATTTTTAAAACCCTAATTTTTTTTTTGATAAGATTTGGTGAGAGACTGAGTTTGGGGCTTTGCAATTCGGATGAAGATAT AGAAATAAATTGAGAAGGACTTTGGATAACTTTCTCCTTTGGCGATTTGGGTTGAAGCCGAAAATGGCTAACATCCAAAATAATCAAGCGAATC TTAAGGTGGATTTGTTGTAGAGATTTGCTTCTCGCTTGAGATTCGTTTTGCTTTTTCTTGGATTCCTTATAGCCGCGCATCAAAGGATTTGGGA AGAAAAGAAATCTTACATGAAGTGAGTATGAGAGATGAAGAATCTTTGGACTTGAGATGTTGGTTTACTCTTTTTGGAGAGAGAGAGACGCCTA GGAGAGGGATTTTCGGATTAACTGGACATAAGGGAGGTTGAAGATGAGAAGTAAAAATCTTTCCTGGTCTTTCT |
Primers for UN46634 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CTTTCTCCTTTGGCGATTTG | 59.817 | 20 | AATCCGAAAATCCCTCTCCT | 58.989 | 20 | 272 | 124 | 395 |
2 | GAAGCCGAAAATGGCTAACA | 60.209 | 20 | AATCCGAAAATCCCTCTCCT | 58.989 | 20 | 248 | 148 | 395 |
3 | TGAAGCCGAAAATGGCTAAC | 60.209 | 20 | AATCCGAAAATCCCTCTCCT | 58.989 | 20 | 249 | 147 | 395 |