Simple sequence repeat (SSR)
>UN46470 TCCAAATTTAAACCATGATGCTGAATATGATGATGATGATGATGGTCTTCATATTCATCATGATCATCCATATATGGATCATGGTCATCATCAT CAAGATCATCATGTGACCCTCGTCTTCCATCATTATCATGGTCATCTCGAGCTCTAAGAGCTAATCTTAGTGAACGCTGCAATTCAGGATCAGG AGGCAGATGCAGACGATTCCCGTTGTGATAAGAGCACATTTCTTCATAATACAAGTGTTTCGAGCTGAGAATCTTTCTGACTTCGTCTTTTGCT TTATCAGAAACATGATCCATTAAATCAAGAAGAGAAGGATTCTCGACAACTTCACAAGAAGTACCTCTTCCAAGAATCTCATTAAGTCTTTTGT AACGTTTGTTAAGATCATTAAACTTATCCTCACATTGCTGGGGTGAAACAAAATGACCCCTTTCCGCCATAACTTTTGAAACCGATTTCCACTT ACCCTTCTTTTGCAAATTCGCATATTTCCTTCTCGCCCCACCTCCATGTTCCATAGAAGCATCTTCACCTATGTAAGAAACAGCAGTTATCAAA AGCCTCACCATCGGATCACTCCATTTCACACGGTGCCACGTCGACATATTTTTCCCTCGGTTTTCATTGTTCTGATTATCATGACCCTCTTCAG TAAAGCTAGGCTCATCCTCATCACTAACAGAATTTTTCCCCCTATCCCCTTTCCCCAAATCAGACAACGCAACAGTTTGGTTATGACGAGTACA ATCTTGCATCACTCCCATTCTAAGAGGGAAACTCTCGTGAATCGAAGCATGAACCATGCTTCCTTGTTGTCTAGCCGATTGCGCGTTAGGATTA TGATGATGAGGCTGATGCATACTAAAAGGGCTGTTACTAATGTTACTGTTAAGTTGTTGATGATGAAGTCGCATATTACCTTGCAAATCGAAAG TTCCACCCGAACCCGAAATCATATTCCCAGATGATAAATTACCCTCCATAGATTAAAAACTAATAAAATACTACCACAAGCAAATTAATTTTAA AAAATCCCTAATTTCCACCTTAAAACACACATCAAATTCACTCACAAAAACCTAAATTCAGCTAACAGAACACAAATCAAGATTCCATCTTTTT GTAATAAAGATTGGTACTTT |
Primers for UN46470 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CCAAATTTAAACCATGATGCTG | 59.363 | 22 | ATCTGCCTCCTGATCCTGAA | 59.761 | 20 | 195 | 2 | 196 |
2 | CCAAATTTAAACCATGATGCTG | 59.363 | 22 | TGTGCTCTTATCACAACGGG | 59.716 | 20 | 225 | 2 | 226 |
3 | CCAAATTTAAACCATGATGCTG | 59.363 | 22 | ATGATGGAAGACGAGGGTCA | 60.475 | 20 | 126 | 2 | 127 |