Simple sequence repeat (SSR)
>UN46131 ACAGGAACAGGTGACCAAAACTGAACTAGCACCCCCTTCTCACGGAATTTTAAACCTTTGAGCGCAGATGTGATTTTTTCCTTAATCATGTGTT GGTCTAAGATATTCTGTTCAACCATCATATTAGAGAAACTGGGGGGTAGAGGGGACTCCGGTTCATCTATATCGCGAGTTCCGAAAACCCAAAG AGATGTCAAGTATCTTCTATCTTCAGCATCATCAACATCTTCTTCTTCTTCTTCTAGTGTTGCATTTGAAGGGTTCATAGGTTGGTAAATGCAA GGATATCTAGATTTCATACTAGCTAAAACATCTGAATTGCTACTTCCACTTTTACTACTATTTTCTACAGGCAAATTGAAAGACAC |
Primers for UN46131 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TCCGAAAACCCAAAGAGATG | 60.044 | 20 | GCATTTACCAACCTATGAACCC | 59.614 | 22 | 107 | 174 | 280 |
2 | TCCGAAAACCCAAAGAGATG | 60.044 | 20 | CCAACCTATGAACCCTTCAA | 57.52 | 20 | 100 | 174 | 273 |
3 | TCCGAAAACCCAAAGAGATG | 60.044 | 20 | ACCAACCTATGAACCCTTCAA | 58.423 | 21 | 101 | 174 | 274 |