Simple sequence repeat (SSR)
>UN01980 CCCAAGATGATATAGACTTCTTATGCTCTTTTTACTTCTTCCAATGTTACTTTTTTGGTCTCTCCTCTAGGTAATATTTTTACAAATCCCAGTT TCTTAGTTCTAACTCATTTAGATTTTTCGAAAGATTACAAGTGACGAATTCAAATTTTATTTTTAAAGTCCATCATGTTTCGAGAACCGCAAAT GTTCCGGCTACTGTTGCGGCAAGAGTGGCGCAAAAAAACATGGTTGGGTGATGCGTCTTTGGTCGCTGCTGTGAGGAGGGTGGTGGCGGCGGCG GAACGGTGGTGGCGGCGGTAGTGTGCCGGTGGGTGGGAGTAGAGCTTGGTTGGAATTGGGTGTGTGTATTTTATTTAGATGAGAGTGTTTTTTT TTTTGTGTGTGTGTGTGTGTATATTTTTAGATGATAGCGTTTTTTGTGGGTGTGTGTGTATTTTAT |
Primers for UN01980 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GTTTCGAGAACCGCAAATGT | 60.118 | 20 | AAATACACACACACCCACAAAAA | 59.21 | 23 | 269 | 171 | 439 |
2 | GTTTCGAGAACCGCAAATGT | 60.118 | 20 | AAAATACACACACACCCACAAAA | 59.21 | 23 | 270 | 171 | 440 |
3 | GCAAATGTTCCGGCTACTGT | 60.14 | 20 | AAATACACACACACCCACAAAAA | 59.21 | 23 | 257 | 183 | 439 |