Simple sequence repeat (SSR)
>UN45710 GGCTAAAGCTGCATCATTTTGCTTGTAGCTGGCCCAACATTTTAAAGGTTCATATCCTTTTCTAAAAGAAATCTGTAATTTATTGCTTAGAATT AATTCCTATAGAGATCTATACCGGTCCCATGAACAAATTCTTTCGTGTTTTCACACTCATCGAAAGGTTCCTCCAAAAGATGGTGTCCAAAAAT CAACTGTTGTTTCGTGTGTCACTGGGAATGTACTTGATATCGGTACCAAACATAGCCCTCGACTTCTTAAATCTTGTCTTGATCCTTCCAAAGG TTTATCCGAAATCTGTTGTTGTTGTTGTTGTTGCATGGGAGCAGCTCCATTTTTCATGTATGGAGTACTTAGAACATTAACTTGCTCGTGGAGA AATTTGATGTATTCAATAGCTTCAGTCAGCACGGAAGCCGTATCAGTTTTTCCGAAAGGTGAAACCAATTGTTGGAGTGCAGTGATTCTGTCCC CCATCTTTTCTTTTCTCACCTTAAAAGCAGGCAATGGTGGGTTT |
Primers for UN45710 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TCGTGTGTCACTGGGAATGT | 60.005 | 20 | TTCGGAAAAACTGATACGGC | 60.074 | 20 | 233 | 200 | 432 |
2 | TCGTGTGTCACTGGGAATGT | 60.005 | 20 | AAACTGATACGGCTTCCGTG | 60.132 | 20 | 226 | 200 | 425 |
3 | TCCTCCAAAAGATGGTGTCC | 59.903 | 20 | TTCGGAAAAACTGATACGGC | 60.074 | 20 | 270 | 163 | 432 |