Simple sequence repeat (SSR)
>UN45012 CAGGGTTAGGTGTACGGCCACATCTATACTCATCAATAATGTAAGAAACCACTTTATCCCAATATTCATCTGTCAAGTGTACAACTTCCAGTGG TACATCAACCTGATTGCAAACAGCTTTTGCATACTTCAAATCCTCTTCCCATGGGCATTCAGACCAAAAGTTATCGAAATCTTCTTGAAACCAA ATTTTGAGATAAAAAGCAGTGCAACGATGTACAACAGCATGAAGAAGCAGTAACGCAACGCTACTATCAACTCCGCCACTAATTATTCACTCTC CGCCATCGAACACGATAAATAACTCCGGTCCAGTTCCAAACCCGGTTCATTTGTACGAACCGGTACTGTAGATGCTGATGATGATGATGATGAT ATTGAACAACGAAGTGTGTTAATTGATAGGACTG |
Primers for UN45012 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | ATGGGCATTCAGACCAAAAG | 59.933 | 20 | TCCTATCAATTAACACACTTCGTTG | 59.502 | 25 | 263 | 145 | 407 |
2 | TGCAACGATGTACAACAGCA | 59.902 | 20 | TCCTATCAATTAACACACTTCGTTG | 59.502 | 25 | 200 | 208 | 407 |
3 | ATGGGCATTCAGACCAAAAG | 59.933 | 20 | CAGTCCTATCAATTAACACACTTCG | 59.171 | 25 | 266 | 145 | 410 |