Simple sequence repeat (SSR)
| >UN45004 CTACTATTTACTGCGACAAGCACCACTATGCAAAGGTTAAAGAGACCTGCATGACTCTGTTTGAAGATAGCGTCAGAACTAAGCGGAGACTCCT TGATTTTCCGATGAGCCGGAGTCGACGGCCGATACGCATAATGCACACCTGTCTTCTTCTTCTTCTCCTTCTTCTCTTCATCACGTGCGTCGTC ACGTGCTTCGACCTGTTCCTTATCATTTTCCTTATTACTATCACTTTCACCGTTGGAAGAAGATGACGTCATCGAATCATTATACAATCCGGTA ACAGTTTCCGTTTTGACAGTGGTTGTTCTGCGGCGAATCTCGCCGCGTGGTTCTCCGATCTCCGGCGCGTCTAACAGCGCCATTATTATGCAAC CGAATTGGTTAGAAAAACTGAAGTAATGATATGATTGAAATGAATTGTGTAAAAAATGAATTTG |
Primers for UN45004 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | CCGATACGCATAATGCACAC | 59.983 | 20 | GGTTGCATAATAATGGCGCT | 59.956 | 20 | 255 | 123 | 377 |
| 2 | TTTACTGCGACAAGCACCAC | 59.911 | 20 | GACGCACGTGATGAAGAGAA | 59.992 | 20 | 179 | 7 | 185 |
| 3 | CCGATACGCATAATGCACAC | 59.983 | 20 | ACGTCATCTTCTTCCAACGG | 60.111 | 20 | 135 | 123 | 257 |