Simple sequence repeat (SSR)
| >UN44993 CATACGGCTAAAAAGGGCTTGTAGGAAATAAGATGATAGCTTTTGATCTGTGTCACCATATGGTGAGCTTAGCTCATTAAGCATCCACATGAGT TGTTGCAACCTAGAACTGTTTTTATCCGCAACGGCACGTGCTGCATCTAGCAGCACGTCCGAAGCCCATGTGTTAGTGGTGAATGAGTTTGAGT ATTCCATTGTGACATCTCTAGCTGGTGAGTATGAGTAGTTGATGTTCGGATCGGATGATTGTTGGTGTTCAGAAGTCGAAAAGCCATAGTGAGA TAAGGGTGGTGGAGTGGTTGTTGCGCTAGTTGTTGGAGTAGGTGTGTTGGATAATGATTGGTGGCTATAGGGTGGTTGTTGAGATGAGTAGTAT TGGTTTTGGTTTTGGTGGTGCCTTGAGGAAGAAGAATAGTCTTCTTCATCCATGAAAAAGTTGAAGCATTCTTCTTGTTCTTGTGGTTGTTGGT AGTTGAAATGATATGGCGTTTGTTGAGTGGATGATCTTGAACTGCTTGAGTTAGTTGTTGTAGTGGTGGTTGAGTTGTTAAAAGAATGAGGATG TGGATGATGAGGATGGTGTTGCTTTTGGAAGGTTACAAGCCTAAAGAGAGTATCCATTACAACTAGACATAACAAAGATTCATCACATGTATAA ATGGCATGCAAGTGTGTGTGTGTTTGTGTTGTGTTTTTGTGTTAGTTTTTAACGGGACTTGGAAGAATTTGGATATGGAGAGG |
Primers for UN44993 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | ATGGTGTTGCTTTTGGAAGG | 59.971 | 20 | CAAATTCTTCCAAGTCCCGT | 59.028 | 20 | 153 | 577 | 729 |
| 2 | ATGGTGTTGCTTTTGGAAGG | 59.971 | 20 | TCCAAATTCTTCCAAGTCCC | 58.956 | 20 | 155 | 577 | 731 |
| 3 | TATGGCGTTTGTTGAGTGGA | 60.111 | 20 | CAAATTCTTCCAAGTCCCGT | 59.028 | 20 | 248 | 482 | 729 |