Simple sequence repeat (SSR)
>UN01906 TGTAAAAGCAATGATATTATCAGAGCCCGACAGCTGACCAAATGGGTGTTGCTTGTAGTATCTTCGCAAGTCTACAGTCCGCTTTTGGTTTTTA AAATCTGCAACCCCGATATATCTTAGAACTTCTCCAACATCCTCAGCTTAGTACTATTTGCTTCATGTTGTCGTGCCCGTGTATATATTGTGTC CAAATTTATTCATATGTGACCTTGTTTCTTCTTCTTCTTCTTCTTCTTTTTTAATGGATATGTAATGGGCATATGACTACATCCACCTGACATG ATTGAACTTGAATATGTCGGGGCCCGCCCACACTTTTTGCTTGACAGCGGGTTGGACTCTTTAATTTC |
Primers for UN01906 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TTTTAAAATCTGCAACCCCG | 59.937 | 20 | TTAAAGAGTCCAACCCGCTG | 60.241 | 20 | 257 | 90 | 346 |
2 | TTTTAAAATCTGCAACCCCG | 59.937 | 20 | TAAAGAGTCCAACCCGCTGT | 59.734 | 20 | 256 | 90 | 345 |
3 | TTTTAAAATCTGCAACCCCG | 59.937 | 20 | TGTCAAGCAAAAAGTGTGGG | 59.734 | 20 | 239 | 90 | 328 |