Simple sequence repeat (SSR)
>UN44305 TGCTGTAAATTTTTTCTTTTGATCATTTATAAAATCTGGAAATAAAAGTATATAGTAATGTTCAGGTCCATATATATGTTATTGCTATGATAGT CATCTTGGTCTAAATCAAACAAGTCAACAACATACTCTTAAAGTTTATCAATCTATGAAGAGATCGTTGAATGAACTATACTCATTTCCTCCTT TTGTGGCTCAATACAAAATCATCATCATCATCGCTATCATTTATAACTCGTTTCTGTGGTTTTGCATCCCCGTTCTTTGAGACGGGTTGTGGAA TCTTTGAACTTTCGCCTCTACTTGGTGGCGAGAACTGTTGGGGCTTTTTTGAACTTTCCCCTTTACTAGGTGGCGAAAACTGTTGAGGCTTCTT TGAACCTTCGACTCTATTAGGTGGCGAAAACTGTTGAGGCTTCTTTGAACCTTCGACTCTATTAGGTGGC |
Primers for UN44305 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TCATTTCCTCCTTTTGTGGC | 60.051 | 20 | GAAGCCTCAACAGTTTTCGC | 60 | 20 | 199 | 176 | 374 |
2 | TCATTTCCTCCTTTTGTGGC | 60.051 | 20 | GAAGCCTCAACAGTTTTCGC | 60 | 20 | 244 | 176 | 419 |
3 | TCATTTCCTCCTTTTGTGGC | 60.051 | 20 | ACAACCCGTCTCAAAGAACG | 60.149 | 20 | 103 | 176 | 278 |