Simple sequence repeat (SSR)
>UN43881 CAGCTCCCATTGTTTCCCCGTGAGGTCTATCAGTTCTTCATCATCATCATCAGACGATACCTCAATGACAGATGTGGATGGCATTGGTGGATCA TGAGATGAAAGAGTTTTATTTTCATGGTTCTTTTCAACTTCTGAATTGATGTGTAGAAGGTTAACAGTATGCCTAGTTGCATCTTTACAAGACC TTACAGGCTGCACCCTATTTCTGCTTGTATTAGCTGTAGAATAAATACTCTCTCCCAAAGAGTTGCATTCTTCTTTCGCCACCTGATCTGGGAG ATGTGGTTTAAGTTTGGCAGCACACTTCTTGAGAACTTCATCCCCCAGTTTCCAACAAACAGGCGAAGTAATCTG |
Primers for UN43881 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TTCCCCGTGAGGTCTATCAG | 60.065 | 20 | ATCAGGTGGCGAAAGAAGAA | 59.813 | 20 | 262 | 14 | 275 |
2 | TTCCCCGTGAGGTCTATCAG | 60.065 | 20 | TCAGGTGGCGAAAGAAGAAT | 59.813 | 20 | 261 | 14 | 274 |
3 | TTCCCCGTGAGGTCTATCAG | 60.065 | 20 | TAGGGTGCAGCCTGTAAGGT | 59.757 | 20 | 192 | 14 | 205 |