Simple sequence repeat (SSR)
>UN43589 CCATAACGTTCTCGAAGATCTGGAACAGCAGAGGCAGCAGCAAAAGCACGTTGCAACAATGGATCTAAACTTTCTACCTCAATGTTAAAACCAG TTAGCTCGGAAACAGCTTTTTCTGCTGATGATAAGGATGACAAAGGGAATAACCACAATCTTTCTTTTGCATTCCAACTCGCTTTTGGAAGCTT GCGCATTGCTCCCACAACAACCTCATTATATGGAAATTTTGCAGCAATGTTTCCACTAGCATGCAAGAAAAATTTAATAGATACTTTTGGTCGA GACTTAGAACAATCATCTCCCGTTGAATTCTGTGATGTTCCTACTGCTGGTTTCACTGGAGTGGTTGGCAAAGAATTTACCTTGTTGGCGGGAG GAGGGCGAGAGATAGGGTTTGAAGGTTTGGGTTGTGATTGTGAGTTGTTATAAAAGTTGTTGGGGGCATGAGTAGTAGTAGTAGTGTTGCGTTG AGCAGCGATGCGATTGATGGCGTCTCTTTCGAGTGAATCGAGTTCCTCTGCACTGAATTCCCAATCATCACTATCCATTTCCTCTCAATTCTTC TTCTTGTTTGGTTTTTTGATTTTGAAGAGGAGGGGGGTTTTCTTTTCAAAATGAGGGTTTAGTTTAGTTT |
Primers for UN43589 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GCTGGTTTCACTGGAGTGGT | 60.159 | 20 | GGGAATTCAGTGCAGAGGAA | 60.195 | 20 | 205 | 328 | 532 |
2 | AGGGTTTGAAGGTTTGGGTT | 59.707 | 20 | GGGAATTCAGTGCAGAGGAA | 60.195 | 20 | 143 | 390 | 532 |
3 | GCTGGTTTCACTGGAGTGGT | 60.159 | 20 | TGATTGGGAATTCAGTGCAG | 59.648 | 20 | 210 | 328 | 537 |