Simple sequence repeat (SSR)
>UN43554 CAGCCAAGCATTTGAGAAACCAGAAATCGAAGTCGAATACCATCCAATTCAGTACATCAAAAATCATGACCAAGTTTCCAACTCTCTATACAAC AACAATACAAACTACAAACAATATCAAAAGCCGATACCGAGAGCGATAACCTAACTCGTAGACGCGCCATCATCCATCTTCTTCAACCCACCAC AATGATCATGATGATCACAATGATCGTTTTCATCATCACTAGAATCTTCATCAAAAGGCTTTTCCTTATGAAAAATACAACACTTTTTGGAGCT TTTTTTCTGCAAAAACTCGTTATCGACCGTACCTTCTTTCCACGTCACCTTCTTCTTCCTCGGATTCAAAGTTAACGTTATTGTCTGTGTTTGT GTTGCTGATGCTGGTTGTGTTTCAACGGTTACGATTGTTGTTGTTGTTGTTGTTGATTGTGATGATTGTCGTGCCATTTTTTTCCTAGGGTTTG GTGTGTGTTTTTAATGT |
Primers for UN43554 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CGTCACCTTCTTCTTCCTCG | 59.982 | 20 | AAATGGCACGACAATCATCA | 59.931 | 20 | 131 | 325 | 455 |
2 | CCACGTCACCTTCTTCTTCC | 59.697 | 20 | AAATGGCACGACAATCATCA | 59.931 | 20 | 134 | 322 | 455 |
3 | CGACCGTACCTTCTTTCCAC | 59.592 | 20 | AAATGGCACGACAATCATCA | 59.931 | 20 | 150 | 306 | 455 |