Simple sequence repeat (SSR)
>UN42698 GCCCTCTGTAGTAACTAGCCTTTGACCAAGAAATAGGAGCCTTAAGATGTGGCTTTATACTTGCGAATTCGGGTGGTAAAGACTCTACAATCTC AATATCGTCTCTTAGAACATCCATGAAATGCCTCCAGTCGAAAATGTCCTTAAAATCACTTGGATCAGTCCAAAACGATTGATGATCAAGCGAA GGAAGAACAAGGGTAGCATTCATGATCTTCGCAATGGCAACCATGTCACATATCCCAGTTCTCATTTGATTTAAACCGCCATTGGCATGAACAA GAATATACCCGTTTGTCGCCGAGGTTGTTTTTATTCGATTCCTTGGTCTAACAATGCATTGATGATAGTCACTGCTGTTTGGTTTCATCCAAAT TTCTTGAACAGGGTAATTGTAGTATTTTTCGAGGACCCGGGTAGGCGGCATTGAAGAAGAAGAAGAAGAATGATCAACAACATCAGATAAAATT CTCTGAGCCTCTACTGAATTATAATCCCTCAATATCAACTTTCCATTATTAGTAACATTATCATCATCATTCACCCGACAACCCGCCATGTAAG AAACCTTAACACAAACCATAAAAAACACAAAAACAACTAAAAGAAACATGCCACGTCCCAGAATCTTCCATGACCTTAGAGACTTGATGAAACA CATCTTTTTTTCGGCGCCTTTTCGAAAATAAAAATAGTTGTTTGTAGTACTAGTGTTGTTATCTATGAAGACGTGACGACGGTGGTGCGTAGAG TGTTGTAGTCCTCCTCCTCCTCCGGTAGTGGTTGACATTCAAAATATATGTATAGGAGAACGAAAACTGTAGAAAATTTAGGAAGAAAAACCGG TGAAAA |
Primers for UN42698 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | AAAAGAAACATGCCACGTCC | 59.978 | 20 | TTTTCACCGGTTTTTCTTCC | 59.04 | 20 | 250 | 603 | 852 |
2 | CACGTCCCAGAATCTTCCAT | 59.927 | 20 | TTTTCACCGGTTTTTCTTCC | 59.04 | 20 | 237 | 616 | 852 |
3 | AAAAGAAACATGCCACGTCC | 59.978 | 20 | TTTTCACCGGTTTTTCTTCCT | 59.967 | 21 | 250 | 603 | 852 |