Simple sequence repeat (SSR)
>UN42640 CGGCTGCGACAGAGGTTTCCGGTGGCTGGCGTCGGCAGCAGATGCGGCGGTCGACGGCTCAAAACATATTATTCCAGCGCCAGCAACTTTCCAG CGGCGGCATTAATAAGTTTTTTCCGGCGACATTTCCTTCGGCATTAATAAGTTTATTCCAGGCAGTATTTCCTTCGACATCAGTTTTTACGGCG ACATCAGTTTTTTTCCGGCTACGGTCGTAGAAACTCAGATCTGTAAAAGATGGGGTTTCAATGGTCTTTTATGGGTCATTTTATTCGGAGATGA TGGTCTCTTTTGTGATGAGGGTCTCGGAGGTGGTGATGGTTCGGTGGGGGTGAGATTATTGGTGATGATGGTGGAGGATGAAAAGAGAGAAAAA GATAAGAATGTGTTTGTATGTGCTTGTTTTTTTTAGGTGAGAGAGAGAGAGATGATGAGAATGAATGGGTGGGGAGAAGTTAT |
Primers for UN42640 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GGGGGTGAGATTATTGGTGA | 59.605 | 20 | ACTTCTCCCCACCCATTCAT | 60.575 | 20 | 129 | 328 | 456 |
2 | CGGCTACGGTCGTAGAAACT | 59.401 | 20 | ACTTCTCCCCACCCATTCAT | 60.575 | 20 | 253 | 204 | 456 |
3 | TGGGGTTTCAATGGTCTTTT | 59.264 | 20 | ACTTCTCCCCACCCATTCAT | 60.575 | 20 | 218 | 239 | 456 |