Simple sequence repeat (SSR)
| >UN42584 CCGCAAGACTAACCATTCGTTCAAAAAACAACAAATTTCATACACAGTTCTTTTAGCATACATCTGTCCGCTTCATGAAAACATCTGTCCACTT CATGAAAAACTGTGGATGATACAACATGATATCATAAAATCGTAACTTAACTTCCATTCTGGCGATTCTGCGAATGAATGATCAATCTCAACCG TTGATACGAATCCCGACAAACGTGAGCATAATCTGACATAGCTCTAAAAAGCTCAGGCAACCGAATTTTAAGACTCCCTAAAGATTTATCCCTC ACTTGAACACAAAGCTTTTGATGAGCTTCCATTTCATCTTCAAGCCTCTTTTTCAACGACTCGACCACAAACTGTCTCTCTGCTATCGGATCTT TAGAATCTGTACCCGCTACCCCCGTTTCTTCTTGTGGGCCCCTTCTCATGATATACTTTTGATACCAATCTTCAAAGGCTTGGTTTTTCCTCAA GTACTCTTTTCTGGTTTCTTCCCATTTGTCTTTAAGTTTCATTTCTTCTTCTTGATGGTTCATAATGGTTTCAATAACCGCAGCAAAAGAAGAA ATAGCACTTTTCGCAAGTTCATCCGGAAGCTTCTGAAGGTGGTCGTGCCACGAATGGAGGAGCGATTGGATAGGAGGTGTTTGGATTCTGGGTG GGGATGAGATTTTTTCTTTTAAGCTGCTTTCGATGGGTATGAGGTTTAGTTTTAACCAGTTGTTGAGGGCTTGAACGTAATGCTTTTGATGGAT TACTAGGGTCTCAAAATGTGAGTGCCACCCTTGAACCACGTGATAAAGCTGAACAGTTCTTTCGTAGTGATGTTTGGTTGTTTCTTTGGGTTCT CCTGAAGCGTCAAGTGATTTGAGATTTGAGACAATTGTTAACTGGTTGTCATGATGCTCGCACATTGAGTCCCACATCTTCGACATCCCGTCAA CAAGAGCAACAAGTTTCGGGTATAACTGCTTATCACGGATATCATTTACTTCTGACACAGTTGAATCCAAAGATTGCATGTCAACAATGTATCT TGTATGCAAATGACTCACAGCTGCCTTTGTTTTTTCTAAAGATTCGGTACTCGCACTACGTTTTTTCAATTTGTTAAGCAATGCGACCTTCCTT TGATACTCTAGCTTCATAAGCTCACCAGCCTTCACTTCTTCGTAGAGCTTTTTCTCCCATGCAAGAAGCTTATCAAGCACGGTGGCATGTGTTT CATATTTATCCTCATCATATTCATCATTCCCATTTTCACCAGGCACACCTTTGAACGATCTGTTCCATGTGATCACGCGCATCACTCTTGCAGC ATGATCAATGTGACCTCTATTATCTGCAAAATTCGAGTGATAATGCAACCGCGTGGCCTCAAGCATCTTGGATACCTCTTGTGCACTCTCGGAA GCCTTCAAGAAATGATCATCTATTTCACCCAAAATCTTCAACAAATTCACACTACTCGACCCAACAACCATACCACCACCTCCTCCATTTACCA CACCTCCGCCACTTCTCCGGTTAATATCTGGCGGTGCAGTATTAGAATGCATAAACTGTTTATCCTTCATCGGCATCATCACCGGCGTCTCCTC TTCCTCAGTCGTGAAACCCTCCATAACCACTTTTTCCGGTGTTTTCGGCTCAACCTGATGATGGTGAATGTGGTGGTTCTGATGGTGACGGAGG TGGTGCGGCTCTTCTTCTTCTTCTTCCTCCTCCTCTTCATTCTCATCTTCA |
Primers for UN42584 SSR
| Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
|---|---|---|---|---|---|---|---|---|---|
| Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
| 1 | GACCCAACAACCATACCACC | 59.95 | 20 | TGAAGATGAGAATGAAGAGGAGG | 59.835 | 23 | 276 | 1468 | 1743 |
| 2 | CGCCACTTCTCCGGTTAATA | 60.089 | 20 | TGAAGATGAGAATGAAGAGGAGG | 59.835 | 23 | 233 | 1511 | 1743 |
| 3 | TCGTGAAACCCTCCATAACC | 59.79 | 20 | TGAAGATGAGAATGAAGAGGAGG | 59.835 | 23 | 137 | 1607 | 1743 |