Simple sequence repeat (SSR)
>UN42348 GTCTTCTCAACTTCTGGCTCCTCTTGTACAATCCTTGGCTTCTTTTCATCCTCCACACGATTGCAACTAGAGCACCGATGACCGTCATGGCTCT TTTTATCAAAGTCATACCTAGGCTGCTCAACCGAATAATGTGGTGGTGGAATATGGTAACCAGGATAGGCACCAGGAAACGGAGGATAAAACCC GTGAGAGTAGAATGATGGTGATGGTGGTGGTGGTGGGTAGTGAGGGTATGGAGGTCGGTAACTGTACTGACCACCACCGTAATAGCCATGGTTG CAACAACCATGATACTCATGTGGGACAGGATAAGGGTTATTGGCACTATAAGGCCATGGTTGTTGATATGGCAGAATCATGGTACTAGGATCCA TTTTCATATGAGGTGTGATCTCTTTGGCTCTTGGATCATCGTTTGGAGCATAAGGCATTGGAGCAGTGTGATGGGGGAATGAGTACGGGTATGC |
Primers for UN42348 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CACCAGGAAACGGAGGATAA | 59.926 | 20 | AATGCCTTATGCTCCAAACG | 60.096 | 20 | 272 | 164 | 435 |
2 | TAACCAGGATAGGCACCAGG | 59.948 | 20 | GCAACCATGGCTATTACGGT | 59.851 | 20 | 133 | 151 | 283 |
3 | CACCAGGAAACGGAGGATAA | 59.926 | 20 | GCAACCATGGCTATTACGGT | 59.851 | 20 | 120 | 164 | 283 |