Simple sequence repeat (SSR)
>UN42230 ATTTCTGAAACGCGATAACAGACATTTTTACCCCAGGAAACGAGATACATTCATACAAACACGAAACATACTATACAACTGAGTAGACGAGACA TCATATCCTCACACAAAGACTAACGAATTACACAGAAAAACACATTCAATTCCCATCTTTTTTTTCTTCACGATACTAATAAGCTAAAAGCCGA ACAAATACAAGAAAATGGGAAAATGAATGGATTATAAGATAGATTAACGACCATTGTTTCGGACAACACCTCCGCCATGGCTTCCACCGGGTCC AACGTTGTTGTTGTTGTTATTTTTGTTATCATAGTTGCTGTTTGAGATGACACCAACAGCATTTTTTATAACCCTAGTAACGTCGCCAAAAATT TGAGCTTTGATCTTTCCTCTTTTGATGGATGGAGTCATTGTTGAAAATTGAAATTTGATGAATGAGTGAAGAGATGTGCCTTTGTGGTGGGGTT T |
Primers for UN42230 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TTGTTTCGGACAACACCTCC | 60.934 | 20 | CTCAAATTTTTGGCGACGTT | 60.11 | 20 | 139 | 242 | 380 |
2 | TTGTTTCGGACAACACCTCC | 60.934 | 20 | TTTTGGCGACGTTACTAGGG | 60.124 | 20 | 132 | 242 | 373 |
3 | TTAACGACCATTGTTTCGGA | 59.013 | 20 | CTCAAATTTTTGGCGACGTT | 60.11 | 20 | 149 | 232 | 380 |