Simple sequence repeat (SSR)
>UN42229 ATTTCTGAAACGCGATAACAGACATTTTTACCCCAGGAAACGAGATACATTCATACAAACACGAAACATACTATACAACTGAGTAGACGAGACA TCATATCCTCACACAAAGACTAACGAATTACACAGAAAAACACATTCAATTCCCATCTTTTTTTTCTTCACGATACTAATAAGCTAAAAGCCGA ACAAATACAAGAAAATGGGAAAATGAATGGATTATAAGATAGATTAACGACCATTGTTTCGGACAACACCTCCGCCATGGCTTCCACCGGGTCC AACGTTGTTGTTGTTGTTATTTTTGTTATCATAGTTGCTGTTTGAGATGATACCAACTGAATCGCCTGTTTTAGTAGTAACAGCATTTTTTATA ACCCTAGTAACGTCGCCAAAAATTTGAGCTTTGATCTTTCCTCTTTTGATGGATGGAGTCATTGTTGAAAATTGAAATTTGATGAATGAGTGAA GAGATGTGCCTTTGTGGTGGGGTTT |
Primers for UN42229 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TTGTTTCGGACAACACCTCC | 60.934 | 20 | CTCAAATTTTTGGCGACGTT | 60.11 | 20 | 163 | 242 | 404 |
2 | TTGTTTCGGACAACACCTCC | 60.934 | 20 | AAAACAGGCGATTCAGTTGG | 60.11 | 20 | 113 | 242 | 354 |
3 | TTGTTTCGGACAACACCTCC | 60.934 | 20 | TTTTGGCGACGTTACTAGGG | 60.124 | 20 | 156 | 242 | 397 |