Simple sequence repeat (SSR)
>UN41714 CACATGGCTCGTCCACATTTTCATGAATATGTGGACAATCTTCAAGAGACTCGTCAGGAAGTCTCAGATTTTTAATCTGTTTTACACACTCTTT TCCCATGTCTCCCTTGAGATCAATATACAAGCACCTACGTAGGTCAAGAGTTTCAAGATGACAACAGCCATCCAGAATCGCCTTCAGCCCAATA TTGGACATACTGTTTCCAATGAGTTCAAGGTGCCTTAACGCAGGTAAAGTTTTCCCAATTGCTATGGCCATCTCATTCTGCCAAGTAATGGAGT CAACATCTTCAATGTAGAATCTATCGGCATTCTGATTCACTCTGAGGGTTTTTAGCAAAGGGCAATAGCGACCAGCAGCTTCAATATCTTCTTC CGAGATTTCTGTAGTGTAAAGGCTGAGTTCTTCCAGCAAAGGAAATTTCTTCAAAACATCACCCCAAGCTCCACAAATTTCACCAAAACAATAA ATGATTTCTAGACGTGTAAGCTGACTTGATCTCTCAGCAACATACTCGAGGAGCTCATAATCGACAAAATCCATAATAGTAAGATCAAGCAATT GGCCTTGGCTTCTATCGACAGCATGCTTACACATCTCTCTAAGTGGAGGCCCTGTACATTGATCTCCATGATTGTCCATAGAAATGACCCTCCA CATAGCAGGGTCCTTGCAGATTTTACGCCAAGTAGTGCATACTTTCTGGGCATTTTCAAGTATATCATACACACCAACTCTGTAAAGTATATTG GCCATTATGTCCGAGGGGAGCTCCAACCAGTTCCTAGTTGGTTGCTTCACCTGCCATCTCTGCTTGGGTTTCGGAACAAACTTGGATTTTTTAG CCTTTCGTCGTCGGTTTGACTTTGATGTGGAGGGCATTTTCGCTTCAGCAGCAAGCCTGTCTCTGATACTTTGTTCACAATCGGTAAAATCCAT GCCAAGAAGTTTTCCCATCTTTATCATTTGAGTCACATCATCTTCTTCATTATCATCTGCTTCATAAACTTTATTCTTATTCTTATTCTTCTTC TTCTTCTTATTCATCTCTTCAGCTTCCTTTTAATTGAATTTTTAGATGTGTTAAATGGGTATAAAAACCCTTATTTGTAAATCAATTTGAATTC |
Primers for UN41714 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TCCATGCCAAGAAGTTTTCC | 60.051 | 20 | TTCAATTAAAAGGAAGCTGAAGAGA | 59.919 | 25 | 137 | 936 | 1072 |
2 | TGCCAAGAAGTTTTCCCATC | 60.051 | 20 | TTCAATTAAAAGGAAGCTGAAGAGA | 59.919 | 25 | 133 | 940 | 1072 |
3 | GGTTTCGGAACAAACTTGGA | 59.948 | 20 | TTCAATTAAAAGGAAGCTGAAGAGA | 59.919 | 25 | 254 | 819 | 1072 |