Simple sequence repeat (SSR)
>UN41576 CGGCTCCCATCCACAAAGGCTTATCAACTTCTGGGCACGTGAATATATGCATAACGCATCATCTCTGTTATTCTCTGAGCCAGATGCAATGTCC GCCTTACACCCAGACTCTCCAGCTGTGAAATTATATGACTGAACCAAAAAACGGTCGATTTCGGGACCTCTAGAGACTCTAATCTGCTCAAGGG TGGAAGCGGACACAATTGGTAGGTAGAGAAATTGAAATAATCCATCACAACGGTCCTTATAACCCCCTATCAATGCTGATGGAGGAGTAGGAGG GAACTGCACTAAACTTTCAGCACAGCTGTTTCCTCTCCAAGGGCAAATGACTTTGTGTCCTTCATCAAGCTGATTCGCAAATTCCTCCCTGACA TTTTCACCTTCTGTAGAAGGTCTTGAATCTGGTGCAACATATTTCAAGGTGGCACCACAAGACTCACATTCAATCTTATCCACATCTACATTTA TCCAGCCTCTTCTTGCACAGGCAAGCGAACTAGCAGCCTTATCCTTCCCAAACCAATTTGCAGGCCTAAATGTAGACAATCGCCTTAGAAGATC ACCCCTTTCCCACGGTCTACATGAAGGCTGAGATGAGCCAATGGCTGAACCAGCGGCACTTGTACTCATTGAAATCCACATGGCCTGTGAACCA ATTCGAGATAGAGAACCTATTTTGGAGCCTTGCCCATGTCCCAACCATTCTGTACTGCCAGCATTAGTGCCAACAGCAGGTGATGACGCCCCAG CAGAACAAGCGGCGGTGGTGGTGGTGGTAGGTGGCGGAGGAGCTGCTGATGAGCTTATTCCTTCTTCTCTCATTTAATTAATTTGATTTCTGAC ACTTGATTATTATGATTTG |
Primers for UN41576 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | AACCAGCGGCACTTGTACTC | 60.321 | 20 | AAGGAATAAGCTCATCAGCAGC | 60.014 | 22 | 204 | 612 | 815 |
2 | GAACCAGCGGCACTTGTACT | 60.321 | 20 | AAGGAATAAGCTCATCAGCAGC | 60.014 | 22 | 205 | 611 | 815 |
3 | CCCAACCATTCTGTACTGCC | 60.375 | 20 | AAGGAATAAGCTCATCAGCAGC | 60.014 | 22 | 118 | 698 | 815 |