Chrysanthenum transcriptome database

Simple sequence repeat (SSR)

>UN41576
CGGCTCCCATCCACAAAGGCTTATCAACTTCTGGGCACGTGAATATATGCATAACGCATCATCTCTGTTATTCTCTGAGCCAGATGCAATGTCC
GCCTTACACCCAGACTCTCCAGCTGTGAAATTATATGACTGAACCAAAAAACGGTCGATTTCGGGACCTCTAGAGACTCTAATCTGCTCAAGGG
TGGAAGCGGACACAATTGGTAGGTAGAGAAATTGAAATAATCCATCACAACGGTCCTTATAACCCCCTATCAATGCTGATGGAGGAGTAGGAGG
GAACTGCACTAAACTTTCAGCACAGCTGTTTCCTCTCCAAGGGCAAATGACTTTGTGTCCTTCATCAAGCTGATTCGCAAATTCCTCCCTGACA
TTTTCACCTTCTGTAGAAGGTCTTGAATCTGGTGCAACATATTTCAAGGTGGCACCACAAGACTCACATTCAATCTTATCCACATCTACATTTA
TCCAGCCTCTTCTTGCACAGGCAAGCGAACTAGCAGCCTTATCCTTCCCAAACCAATTTGCAGGCCTAAATGTAGACAATCGCCTTAGAAGATC
ACCCCTTTCCCACGGTCTACATGAAGGCTGAGATGAGCCAATGGCTGAACCAGCGGCACTTGTACTCATTGAAATCCACATGGCCTGTGAACCA
ATTCGAGATAGAGAACCTATTTTGGAGCCTTGCCCATGTCCCAACCATTCTGTACTGCCAGCATTAGTGCCAACAGCAGGTGATGACGCCCCAG
CAGAACAAGCGGCGGTGGTGGTGGTGGTAGGTGGCGGAGGAGCTGCTGATGAGCTTATTCCTTCTTCTCTCATTTAATTAATTTGATTTCTGAC
ACTTGATTATTATGATTTG

Primers for UN41576 SSR

Primer pairForward primer (5'-3') Reverse primer (5'-3')Product
SequenceTemperatureSizeSequenceTemperature SizeSizeStartEnd
1AACCAGCGGCACTTGTACTC 60.32120AAGGAATAAGCTCATCAGCAGC 60.01422204 612815
2GAACCAGCGGCACTTGTACT 60.32120AAGGAATAAGCTCATCAGCAGC 60.01422205 611815
3CCCAACCATTCTGTACTGCC 60.37520AAGGAATAAGCTCATCAGCAGC 60.01422118 698815