Simple sequence repeat (SSR)
>UN40925 GTTATCAATATCCTCACCCTCACCAACCACCACCGGACCACCACCACCACCACCACCAGAGCCTTTTTCTGGTGGTGGCGATGGAGCATTGTGT TTTGGTGCAGGCACCGAAGACACTGGTGGTGGTTTCGGTGCAGGCACAGAAGACACCGGTGGTTTATGAGAACTCGACTTTGACTTGGACTTTG ATTTACCATTGTGATGATGGTTGGAACCGGATTTCTTCTTGGACAATGAGGTTGATGCACTTTTAGAATGCCTCCAATGCCTTGATGCATTGCA TGTGTGATCATGAGTAGCTGAACTCCATACTAAAATCGCGACTATAATTGTTAATGTGTAGCTTCTAATACTCGAACAACAAGGCATTGCTACA AAGAGTGAGTG |
Primers for UN40925 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TATCCTCACCCTCACCAACC | 59.779 | 20 | GGCATTGGAGGCATTCTAAA | 60.038 | 20 | 261 | 9 | 269 |
2 | TATCCTCACCCTCACCAACC | 59.779 | 20 | CAAGAAGAAATCCGGTTCCA | 60.044 | 20 | 221 | 9 | 229 |
3 | TATCCTCACCCTCACCAACC | 59.779 | 20 | AGGCATTGGAGGCATTCTAA | 59.668 | 20 | 262 | 9 | 270 |