Simple sequence repeat (SSR)
>UN39787 AGCCGCGCCAATATCCCTTGCGCGAGTATTGGGTTGTTTCCATTTTGGATCAAATCTGAAGCTTTATAAAGCTCATCAATGATCCCTTGTTGCT GCTGTTGCAAATGGCTAATAACAACTGGTTGCTGTTGTTGTTGTTGTTGTACCATTTTCTTGACATCTAGGAACGTGTTTTTGTGCATTAATGG GTTGTACTCTACGCTTCCTGAGGTGTACCTTTGTTGCTGCTGTTGCACATTAAACTGCACATTAGGTTTTATATCAAAAGGTGACACCAAATGA GTTTCTGCAGCAGACAAAGGTGAAAACATTTGGTTTTGGTGATGATGGGTCATGAAGCCTTGATCCACCACACCAAACCCACCGGAAAAGTCAA AGTCCGGCGGTGCTCCGGTGACT |
Primers for UN39787 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CTGCTGTTGCAAATGGCTAA | 60.014 | 20 | TGCTGCAGAAACTCATTTGG | 59.988 | 20 | 202 | 93 | 294 |
2 | CTGCTGTTGCAAATGGCTAA | 60.014 | 20 | GACCCATCATCACCAAAACC | 60.034 | 20 | 241 | 93 | 333 |
3 | CTGCTGTTGCAAATGGCTAA | 60.014 | 20 | AGGCTTCATGACCCATCATC | 59.893 | 20 | 250 | 93 | 342 |