Simple sequence repeat (SSR)
>UN39194 CGGGCAACGCTTAGACCTTACTCGTCCAATACACGATACTTTCGGTGAGGACGGTTCAGCGACCGGTCCACCAGTAGATTTTTGCTTAGGAAAT AACCTTGTATTAGCCGGTTTACAGCTTCTTCGGCCCATATCAACATGGGTGTTTTTTTGTGTTTTTGGTAAACCTATTATGGCCGGTTTAGACT TTACGTTGACCGAGAATTTCTGTGAATTAGACTTTGTGTACGTTTTGTTGTTGTTGTTGCTTCTTTTAGTTGATTCTTTACGTTCTAAAAAGGC GTTGCGGTCGAACCAGTCGAATTCGGAGTCTTTTGACAGCCAGAATGAGTCTGGAGGGACGAATTCTGAGCTGTTAGAGATGTCGGGGTTTTGA TCAGCTTCGGTTTCCTCGTCGACGTTGTTGTTGTTGCTTATTGGATCCATGAAGTTTAGGTGAATAATAATATGTTTAGTTGTTTGTGTGTGTG TGTGAGG |
Primers for UN39194 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TGGCCGGTTTAGACTTTACG | 60.124 | 20 | CAGCTCAGAATTCGTCCCTC | 59.95 | 20 | 182 | 174 | 355 |
2 | TGGCCGGTTTAGACTTTACG | 60.124 | 20 | AACAACGTCGACGAGGAAAC | 60.156 | 20 | 232 | 174 | 405 |
3 | TGGCCGGTTTAGACTTTACG | 60.124 | 20 | GGAAACCGAAGCTGATCAAA | 60.192 | 20 | 218 | 174 | 391 |