Simple sequence repeat (SSR)
>UN38502 TTTTTTTGTAAAATAAGATGATTACATATGACCAAAGTTAATATCCATAGTAAATCTTGCAGAACAACACACTAGGAGGAGGAGGAGGAGGAGT AGTAGTAGTAGAGTAATATGATAGAAGCGCAACCAGAGGTTTAATTGTTACAAGTAGAAGCATATGAGTAGTTAGTTGCTGATGTGAATCTCTT CAAGGTTGAGATTCTTGACCAGGGTTTCACTTGAGTCGGCAAGAAGATCCTTGTTTGGGACGCATGATCCTCCTTCAGCTTGTGTACCTGCAGC AGCAGCAGCAGGGGATCTTGGTCGTTTCCTTAGAGGTGGCCAATCAACGCCAGCAGAAGAAAGAGTCATCATAAACGTTCGTCGGCGCTTTTCA AGGTAGGGGTTTGAGAGCGGGGGCATGGCAGCAAGTTTTTCCTCCTCCGGATGAGATGTGGTACCAGGAGGAAGCTTCTTGCGGGTTGGAGCAG GCTTGTATGTAACCTTCAAGGGAATCTCCTTAAACTTGACATGGTATCCTAGTCGAGCAATTGCAGATTCTGAATCAGAAATAGTAGTTTTCGG AATATCGACCCCAGCTGCACGGCTCCGTTCAGGTGGGACACCTTTGGAAGCTAAATACCAATCTAAAGAGCCGGGACGAGGCGGGCCGTTAGGA GCCAACGAACGGCGCCGCCTTTCTTCAAGCCTCTGCTTCGCCAGTTCGGGGTTAGAACTCTTCCCCATCCCCACGATTCGTCCTGCTAATGCTC GTTTCGTATCAGCATCCATCCCGATGA |
Primers for UN38502 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GATAGAAGCGCAACCAGAGG | 59.978 | 20 | CCGACGAACGTTTATGATGA | 59.542 | 20 | 254 | 114 | 367 |
2 | GATAGAAGCGCAACCAGAGG | 59.978 | 20 | AACCCCTACCTTGAAAAGCG | 60.474 | 20 | 274 | 114 | 387 |
3 | TAGGAGGAGGAGGAGGAGGA | 60.284 | 20 | CTCTTTCTTCTGCTGGCGTT | 59.757 | 20 | 275 | 73 | 347 |