Simple sequence repeat (SSR)
>UN38034 TTTCCGGCGACGGCGACGTGACGGAAGATATATGAGACGCGATGAGGAAGAAGAACAAGAACAACTTTGAACAATGATAGACCCAATTCCAATC TGATCCAAATCCGAACCCAACAGGAACTATCGCCAATCGCCAAAAATATTTTAAGAGTTTTGTAAGATGATGATGATGATGAGAGATGGCTGTG ACCCTTGTAGTTCGAATCAGTAAATAGGAGAACAAATAGAAGCTCTTTGACACAACTTTTCTTCTTGGGGCTTTGTGAGAAACCAATCTAAGCA AAGTTTGCTTTCCATCTTCTTATTCCTATGTGCCCTTGTGATTCAGTGTGCGGAAAAGAGAAAAAAACTAATGATAGATGGTGCCTCTAGGTCT TTTGACTTTTGTTGGGATGGTGCGAAGGGTACCAGAAAAAGAGAAGGGGAACAAAAGGATTCATGAATTGGTATG |
Primers for UN38034 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | ACAGGAACTATCGCCAATCG | 60.096 | 20 | CACAAAGCCCCAAGAAGAAA | 60.22 | 20 | 152 | 114 | 265 |
2 | AGACGCGATGAGGAAGAAGA | 60.096 | 20 | CACAAAGCCCCAAGAAGAAA | 60.22 | 20 | 231 | 35 | 265 |
3 | GAGACGCGATGAGGAAGAAG | 60.096 | 20 | CACAAAGCCCCAAGAAGAAA | 60.22 | 20 | 232 | 34 | 265 |