Simple sequence repeat (SSR)
>UN00124 CATTGTTCTCTAACAGCAACCGACTGTCAAGGAGGGGTGAGTACTTCCGAACTTGCTTTTCTTCCGTCTTAGATTCGCAATAAACTTGAATTCG ACTACTACTACTACTACTACACTTTCTCCTACTACCGTTACCGTTGACGTAAACCGATAACCGATTATTCCGGTAATAAAACGAGGGTGAAGTA ATAGCGATGATCGACGACATCGAAGGAGGAGGTTGTTGGAGTAGTAGTAACGGATTTAACAGAATTCTGTTGAGTATTATCATGTGATTGTTTG TTTGTTTTTAGTGTGTGTGTGTTGTGAAGGTGATTGATTGGATTGGAAATTTGGGAATATTTTACTAGGTGATGCACATATGGAGCATTGAATT A |
Primers for UN00124 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | AGGAGGGGTGAGTACTTCCG | 60.502 | 20 | CAACCTCCTCCTTCGATGTC | 59.655 | 20 | 194 | 30 | 223 |
2 | CGAACTTGCTTTTCTTCCGT | 59.494 | 20 | CAACCTCCTCCTTCGATGTC | 59.655 | 20 | 176 | 48 | 223 |
3 | TCCGAACTTGCTTTTCTTCC | 59.429 | 20 | CAACCTCCTCCTTCGATGTC | 59.655 | 20 | 178 | 46 | 223 |