Simple sequence repeat (SSR)
>UN36868 GTACTCGATTCACAGCCATAACAAAAATACACTACTAGTAAAAGAAAGAAAGAAAAGTCGTCGGGTACAAAGTTTTGCAATATTCTTCCAGCCA GCGAGAATAAGTAGTAGTAGTAGTAGTTGTTTAATTAACCCAACAACAGGAGTGGATTAATAGTTGTTGCCACCGGAAAAAGACGAAGAAGAAG TTGGTGCAGCAGCAGGGTTTGGATTTGCAACGACACTTGACTGGCCCTGGCCCTCGCCAAGATTGAGAACGGAGACTCCATTAGAAATTTGATC TACACCTTGAGCATTGGTACCTCCTCCTGCGGTTAATGATAATGGTGGATGAGCATCAGCAGGGAAGGGGTTGTAGTGCTTACTAAAATAAATA GTCCTTTTACAACCTGGTACTTCAATACGGGGGGGAAGGTCATATCGACGTCGTAAGTTAGGGTATAGGACATAGAAAGGAACACAACGCTGGC TGTGTTTAGACACACCACCCTGCAATTTGCAATTTCT |
Primers for UN36868 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GCAATATTCTTCCAGCCAGC | 59.813 | 20 | GGAGGAGGTACCAATGCTCA | 60.073 | 20 | 233 | 77 | 309 |
2 | AATATTCTTCCAGCCAGCGA | 59.807 | 20 | GGAGGAGGTACCAATGCTCA | 60.073 | 20 | 231 | 79 | 309 |
3 | GCAATATTCTTCCAGCCAGC | 59.813 | 20 | TTCTTCGTCTTTTTCCGGTG | 60.22 | 20 | 108 | 77 | 184 |