Simple sequence repeat (SSR)
>UN36847 TTTTTCTCAAAATAAGAAGTTTTGTATTAATGGAGTTTAGGGGGGAAGATAGCTATGATTTCACACATGGATTGATATCAATACAACATCAAAA CCAACAACATACCATATTACAACATGATGATCATCAATGATCTTAAAGATCATGACATAAACTACAACATTCACTGACAAGTGACAACACACTT AAACAAACACAAAACATAAACACATACAAACACGAAATAATTTCACGAAAACTGCTGGAAGAAAGGCATCACCTTCCCTTAGCCTTTTTGACTT GCCTCTATAGTGTTATCCTCCCTTTCCCCTAATCCATTCGATCACAAAGCAATCGAACTAAGAAGGGTATTGCTGCTCACATTCCCTTAATGCC ATCATCATCATCGTCTCCTTCTTCTTCTTCTTCTTTCGCCTGCATCTTAGGTTCACTGATAGATAGCTGATGTGGTACACTTAT |
Primers for UN36847 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | AAACTGCTGGAAGAAAGGCA | 59.993 | 20 | CCACATCAGCTATCTATCAGTGAA | 58.427 | 24 | 215 | 237 | 451 |
2 | TCCATTCGATCACAAAGCAA | 60.197 | 20 | CCACATCAGCTATCTATCAGTGAA | 58.427 | 24 | 137 | 315 | 451 |
3 | AAACTGCTGGAAGAAAGGCA | 59.993 | 20 | CACATCAGCTATCTATCAGTGAACC | 59.234 | 25 | 214 | 237 | 450 |