Simple sequence repeat (SSR)
>UN36845 TTTTTCTCAAAATAAGAAGTTTTGTATTAATGGAGTTTAGGGGGGAAGATAGCTATGATTTCACACATGGATTGATATCAATACAACATCAAAA CCATAGAAAACTAAAGAAGAACAACATACCATATTACAACATGATCATCAATGATCTTAAAGATCATGACATAAACTACAACATTCACTGACAA GTGACAACACACTTAAACAAACACAAAACATAAACACATACAAACACGAAATAATTTCACGAAAACTGCTGGAAGAAAGGCATCACCTTCCCTT AGCCTTTTTGACTTGCCTCTATAGTGTTATCCTCCCTTTCCCCTAATCCATTCGATCACAAAGCAATCGAACTAAGAAGGGTATTGCTGCTCAC ATTCCCTTAATGCCATCATCATCATCGTCTCCTTCTTCTTCTTCTTCTTTCGCCTGCATCTTAGGTTCACTGATAGATAGCTGATGTGGTACAC TTAT |
Primers for UN36845 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | AAACTGCTGGAAGAAAGGCA | 59.993 | 20 | CCACATCAGCTATCTATCAGTGAA | 58.427 | 24 | 215 | 251 | 465 |
2 | TCCATTCGATCACAAAGCAA | 60.197 | 20 | CCACATCAGCTATCTATCAGTGAA | 58.427 | 24 | 137 | 329 | 465 |
3 | AAACTGCTGGAAGAAAGGCA | 59.993 | 20 | CACATCAGCTATCTATCAGTGAACC | 59.234 | 25 | 214 | 251 | 464 |