Simple sequence repeat (SSR)
>UN34792 ATTTAACTTCACCACCAAGCTTTTCATAACTAGCTGCTAATGTACCAGGCATGATACGTAGCTCTCTAGCCTCAACAGTCACAAAGTCAGGATT TGCAACAACCATAGGGATTCGTTTAGCTGCACATTGCTCCAAAATCCTCTCAAGCTCCTCAAGCTTCTTCGAAACTGAGTCGCCAGAAGTAAGC CCCAAGGCTTCGGTACCATGGACCAAAACAAATTCAGCTTGTTCAACACATTCTACAACCTGTAGCCCTAGACCCTCAAGTGATATAGCGCCTC GGTCACTCCATGTCATGTGAATGCAGGTCCTTCCTAGCGCCCCAAACCAAGGATCGTCTCTCCTTTGAAGATGTTGATATGTTAACTCTCCACT GGTGATGGCTCCAACGAAGAGAGAGGGGTCAAACCCAAGGCTCTTCAATTTATCCAATGTTGTTGACGCCCGTCTTGATGAATTACTAATAATG ACCATCTTAGCACCATGAGCAGCCAACTTTTCCAATGTCGATATGGCGCCAGGATAAGGTTGTTTCCCATCATGAAGAACCCCAAACTGATCTA ATAACCATGCCTTGTACTGGGGACGAGGAGGAGGAGGAGGAGTTTGAAGAATTTGTTGGAGACCGGTGAAGCTCTGCAGCACCTTATTGTCACT CAT |
Primers for UN34792 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | ATGGCTCCAACGAAGAGAGA | 59.95 | 20 | TTCACCGGTCTCCAACAAAT | 60.353 | 20 | 254 | 381 | 634 |
2 | ATGGCTCCAACGAAGAGAGA | 59.95 | 20 | CACCGGTCTCCAACAAATTC | 60.353 | 20 | 252 | 381 | 632 |
3 | GATGGCTCCAACGAAGAGAG | 59.95 | 20 | TTCACCGGTCTCCAACAAAT | 60.353 | 20 | 255 | 380 | 634 |