Simple sequence repeat (SSR)
>UN34780 TTTTTTTTTTCAAATGGAAACACCACAATTTATTTGTGTATTATCGAATACATAGAGGAATGCACAACGTACGGAAAACGAGTATTGTAAAGAA TATAATTAAGCTAAATGCATGAACTTTTGGAACGTCTTTGAACGCTTATTTGATCTTTTAGGTATATAACACCCATAGCCTTCAAGATCCACAA TATACAGTCCCCATTAATACAACTCATTTATTTATTTAGTCCTTTGACTTATCCATAGTTCATTAATAGTAAGGAGGAGGAGGGGAACTGTATA CGTAAGGTTTATAGGGTGGTGGTGGTGGTGACTTGTATACATATGGGTGCTTTGGTGGTGGTGGGGACTTATAGACTGGTGAAGGTGGTGGTGG TGGTGATTTGTACACATAATGATGTTTAGGCGGTGGTGGAGGAGATTTCTTAGGT |
Primers for UN34780 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CCCATAGCCTTCAAGATCCA | 60.029 | 20 | ACCACCGCCTAAACATCATT | 59.316 | 20 | 248 | 166 | 413 |
2 | CCCATAGCCTTCAAGATCCA | 60.029 | 20 | CACCACCGCCTAAACATCAT | 60.776 | 20 | 249 | 166 | 414 |
3 | GGAGGAGGAGGGGAACTGTA | 60.447 | 20 | ACCACCGCCTAAACATCATT | 59.316 | 20 | 153 | 261 | 413 |