Simple sequence repeat (SSR)
>UN33707 GGCTCGTCCAGTGGCCTGTCTCATTCTCTTTTCCCGTTCTTCAGAACTCAACGAAGGATCAAAACTTGATTTCCATATGTGTTGTGGAGTAGGG CTCTTCACTGAACTTTCCTCAACATTTGACACTATTGACTTGGAGATTTCTTCTGCGTCAGAGCCAGGAAAGTTGAGAACTAAAGAAGAAAGAA ACGGATCAGAAACAGCAGCAGTTGCTGATGAGGAAGTGATATTTGACGACCTATAACCTCCACCGCCACCACCACCACCACCAAGAAGCACCTG TAGATGAGCCTCTCGAAGATCCCTGCTCAAAAGGGAAAGCGCCTGACTGTTTGGGACAGCTACTCTACGCAGTCTACGACGTCTTTGCAAGTAT TATTTCGTTAAAGATAACTTCAATCAAGAAAAGTAGACGATACGTTATATAATAGGTGTGTTC |
Primers for UN33707 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | AACGGATCAGAAACAGCAGC | 60.406 | 20 | CTTTTGAGCAGGGATCTTCG | 59.948 | 20 | 128 | 188 | 315 |
2 | ATTTCTTCTGCGTCAGAGCC | 59.579 | 20 | CTTTTGAGCAGGGATCTTCG | 59.948 | 20 | 176 | 140 | 315 |
3 | TGGAGATTTCTTCTGCGTCA | 59.522 | 20 | CTTTTGAGCAGGGATCTTCG | 59.948 | 20 | 181 | 135 | 315 |