Simple sequence repeat (SSR)
>UN33404 ACAGCTAACAAAAGGTACAAATCTTGTAAACCAGATATAAAAATATACACACAGTGGAAGGTGAAGTGTGTGTTAGGGTTTATTTTTTATAAAA TAAATAGAGTGACAGGTGTAGTTTAATCTTTGTAGTTCTGGAGGAGAGGGGGAATTATTAATATTCGTGTTAGTATTTGCTGTTTAGAGAGAGA GAGAGTGTGTGTTGTTGTTCTTGCGGACGTCAAAGTAGAATTG |
Primers for UN33404 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | TAGTTCTGGAGGAGAGGGGG | 60.577 | 20 | TCTACTTTGACGTCCGCAAG | 59.072 | 20 | 101 | 127 | 227 |
2 | TAGTTCTGGAGGAGAGGGGG | 60.577 | 20 | CTACTTTGACGTCCGCAAGA | 59.072 | 20 | 100 | 127 | 226 |
3 | CTGGAGGAGAGGGGGAATTA | 60.393 | 20 | CAATTCTACTTTGACGTCCGC | 59.761 | 21 | 100 | 132 | 231 |