Simple sequence repeat (SSR)
>UN30945 CATGCTACCAACCGAATCAACCCTTATCAGGAACCTTGTTTTCATGAAGATTTGTAAGTGAGAAGAGGCGTGGCTTCACTTGTGGCTTCGACAG TATAAATAGAAGAAGAAGAAGATAACTTTGACCATACTTTCTTTCTTAGGGTCTTGTGAAGATCCGACTTGAGCAAAGGTCGTCATCTACTCCG TTTCCAAAGCAACCCCGTGACCTTGTGTGGGTAGAAGAGAAAGGAAGATGGTGACATATGATGCCTCTGAGCCTATGTCTTGGGCAGATCGACC CACGTTGGGAGAGGGCAAAGAAGACAAAACAAGGATGCACCTATATTTGATCTTGCGTTGGGGTGATAGGGAAGAAAAGCAAATATGCAGTATA CCATTTTTATTTCTCCCTTTGGTGGTTTGACCTAGATGAAGAAAAAGGAAGATGATAACCTGGGAAAGTGGTGTTTGTGCTTAGTTTGGGGAAC CGAAGAGAAGAAAA |
Primers for UN30945 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | CTTCACTTGTGGCTTCGACA | 60.025 | 20 | CTATCACCCCAACGCAAGAT | 59.955 | 20 | 278 | 74 | 351 |
2 | CTTCACTTGTGGCTTCGACA | 60.025 | 20 | GCCCAAGACATAGGCTCAGA | 60.362 | 20 | 200 | 74 | 273 |
3 | CTTCACTTGTGGCTTCGACA | 60.025 | 20 | TCTGCCCAAGACATAGGCTC | 60.362 | 20 | 203 | 74 | 276 |