Simple sequence repeat (SSR)
>UN30428 GTTTGATGTATATGATTCCATTGTAGTGGATGTTGATGGTTCCATTTTTAAACTCAAAGGGGTCATAGTGTTTGATGTATGAGATTCCACTGTT GTTGATGGATCAATACCTAACTGATTTGCAATTTCTTGTCTGTTGCGTTTCTCTGTTACATTGCTCAAGACTCTCTTCTTCTTCTTCTTCAAGA CTATTCTCCTATCTTTGTTTGAGGCAATTATCCTACTCTTGGAGGCTATTCTCTTCTTTTCTTCCTGTTTTAATATACCACTGAAGGCCGTCTT CACGGCTTCTTGCAACCAGCGAGGCGTAAGTTTGATGATTGTTTCTTCTTCAAGGGTAGGTCTCTTACGTTCATCTTTATGGGAGCCAAACGAC CATATTGCTGATGAAGACGATGAAGGTTTCTCCATCGATAAATAAATAAATTAGATTAGATATGCAGCTTCAGAGATTGATTCATAGATCTTGT TATCCCCTTAAACAGT |
Primers for UN30428 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | GCAATTTCTTGTCTGTTGCG | 59.469 | 20 | GAAGACGGCCTTCAGTGGTA | 60.255 | 20 | 162 | 122 | 283 |
2 | GCAATTTCTTGTCTGTTGCG | 59.469 | 20 | CAATATGGTCGTTTGGCTCC | 60.331 | 20 | 262 | 122 | 383 |
3 | GCAATTTCTTGTCTGTTGCG | 59.469 | 20 | ATCAAACTTACGCCTCGCTG | 60.407 | 20 | 197 | 122 | 318 |