Simple sequence repeat (SSR)
>UN30113 CTTTTGTTAGTCATCCATTCAGAGAGCTGAAGAGCGTGCGAATACCGATTGCGATTCCTGAGCAATTTAACCATATCTAGAAGCTTATTATTGT TTTTCACTACCTTAACATTATTCCCTTGTTGTTGTTGTTGGTGTAGCCATTGGTCCAATATTGGAACAAGTGAAGTGTTGGGTGTTATTGCAGC TGGTGATATCATGTTATATAAAACTTGTACTTGATCATTCTCTTTTGCATTTTGGGTGGTGATGGTGGAGAATGAGGTGTTGTATAAAAGCTTT GGAATGTGAGTTGAAGAAATTAGTTTGTTGTTGAAGGGTTTTAGGAGATGTACCATTTTTTACTGGTTTCAAGAGTTTCAGGATGATTATGATG ATTTCTGTTTGTTGTTGTTGTTGTTGTTG |
Primers for UN30113 SSR
Primer pair | Forward primer (5'-3') | Reverse primer (5'-3') | Product | ||||||
---|---|---|---|---|---|---|---|---|---|
Sequence | Temperature | Size | Sequence | Temperature | Size | Size | Start | End | |
1 | AATACCGATTGCGATTCCTG | 59.923 | 20 | TCACCAGCTGCAATAACACC | 59.722 | 20 | 154 | 41 | 194 |
2 | AATACCGATTGCGATTCCTG | 59.923 | 20 | CCTCATTCTCCACCATCACC | 60.326 | 20 | 225 | 41 | 265 |
3 | AATACCGATTGCGATTCCTG | 59.923 | 20 | ACCACCCAAAATGCAAAAGA | 60.344 | 20 | 208 | 41 | 248 |